Transcript: Clstn3-001 OTTMUST00000054787.1

Description

calsyntenin 3

Location

About this transcript

This transcript has 18 exons and is annotated with 25 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Clstn3-001	OTTMUST00000054787.1	4014	956aa	OTTMUSP00000026175	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20519	Q99JH7
Clstn3-002	OTTMUST00000054788.1	3703	919aa	OTTMUSP00000026176	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3Z601
Clstn3-003	OTTMUST00000054789.3	366	64aa	OTTMUSP00000073360	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SW90	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Clstn3-006	OTTMUST00000054792.1	728	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Clstn3-004	OTTMUST00000054790.1	391	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Clstn3-007	OTTMUST00000054793.1	765	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Clstn3-005	OTTMUST00000054791.1	474	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 4,014 bps Translation length: 956 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20519

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 20/03/2015 (Created on 31/01/2007)

Alternative symbols

RP23-308E4.3-001

Other assemblies

This transcript maps to 124,430,759-124,464,794 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000008297

Curation Method

Manual annotation from Havana