Transcript: Cped1-001 OTTMUST00000054933.3

Description

cadherin-like and PC-esterase domain containing 1

Location

Chromosome 6: 22,017,066-22,240,003 forward strand.

About this transcript

This transcript has 21 exons and is annotated with 4 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000022850 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cped1-008	OTTMUST00000054940.1	5690	1026aa	OTTMUSP00000026245	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39435	B2RX70
Cped1-001	OTTMUST00000054933.3	2484	828aa	OTTMUSP00000026242	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q7L8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Cped1-003	OTTMUST00000054935.1	2002	473aa	OTTMUSP00000026243	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YUQ2
Cped1-002	OTTMUST00000054934.2	3520	162aa	OTTMUSP00000065248	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	S4R2A1
Cped1-004	OTTMUST00000054936.1	1794	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Cped1-005	OTTMUST00000054937.2	645	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Cped1-006	OTTMUST00000054938.2	399	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Cped1-007	OTTMUST00000054939.1	643	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 21 Transcript length: 2,484 bps Translation length: 828 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/07/2015 (Created on 01/02/2007)

Alternative symbols

RP23-249M4.1-001

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 22,017,066-22,240,003 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000137437

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Cped1-001 OTTMUST00000054933.3

Summary

Transcript-based displays