Transcript: Sez6l2-003 OTTMUST00000056010.1

Description

seizure related 6 homolog like 2

Location

Chromosome 7: 126,950,966-126,970,270 forward strand.

About this transcript

This transcript has 18 exons and is annotated with 50 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000023164 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sez6l2-001	OTTMUST00000056008.1	3732	910aa	OTTMUSP00000026876	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS57585	Q4V9Z5
Sez6l2-002	OTTMUST00000056009.1	3595	923aa	OTTMUSP00000026877	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40135	-
Sez6l2-003	OTTMUST00000056010.1	2852	863aa	OTTMUSP00000026878	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS57586	-
Sez6l2-004	OTTMUST00000056011.2	1192	246aa	OTTMUSP00000026879	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Sez6l2-005	OTTMUST00000056012.2	641	136aa	OTTMUSP00000074739	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Sez6l2-008	OTTMUST00000056016.1	3686	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Sez6l2-006	OTTMUST00000056013.2	575	67aa	OTTMUSP00000074740	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RPR3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Sez6l2-007	OTTMUST00000056014.1	639	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 2,852 bps Translation length: 863 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS57586

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 03/07/2015 (Created on 15/02/2007)

Alternative symbols

AC122863.3-003

Other assemblies

This transcript maps to 126,950,966-126,970,270 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000106332

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Sez6l2-003 OTTMUST00000056010.1

Summary

Transcript-based displays