Transcript: Sepsecs-004 OTTMUST00000056607.3

Description

Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase

Location

About this transcript

This transcript has 8 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sepsecs-001	OTTMUST00000056604.3	5252	504aa	OTTMUSP00000027225	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19286	Q6P6M7
Sepsecs-002	OTTMUST00000056605.2	5185	91aa	OTTMUSP00000027226	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RGM2
Sepsecs-004	OTTMUST00000056607.3	3665	130aa	OTTMUSP00000039116	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6YLP3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Sepsecs-003	OTTMUST00000056606.2	751	67aa	OTTMUSP00000039115	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6ZFG8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Sepsecs-005	OTTMUST00000135277.1	1841	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 3,665 bps Translation length: 130 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 27/10/2014 (Created on 21/02/2007)

Alternative symbols

AC120128.1-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 52,641,176-52,666,000 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000126574

Curation Method

Manual annotation from Havana