Transcript: Cops7a-002 OTTMUST00000056797.1

Description

COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)

Location

Chromosome 6: 124,958,413-124,965,538 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000023393 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cops7a-001	OTTMUST00000056793.1	1817	275aa	OTTMUSP00000027339	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20539	Q9CZ04
Cops7a-002	OTTMUST00000056797.1	1328	277aa	OTTMUSP00000027343	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51909	-
Cops7a-005	OTTMUST00000056800.2	795	226aa	OTTMUSP00000027345	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cops7a-004	OTTMUST00000056799.1	608	176aa	OTTMUSP00000027344	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cops7a-006	OTTMUST00000056801.2	327	79aa	OTTMUSP00000027346	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cops7a-007	OTTMUST00000056802.1	768	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Cops7a-003	OTTMUST00000056798.1	486	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 1,328 bps Translation length: 277 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51909

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 24/03/2015 (Created on 23/02/2007)

Alternative symbols

RP23-130D15.1-002

Other assemblies

This transcript maps to 124,958,413-124,965,538 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000112439

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Cops7a-002 OTTMUST00000056797.1

Summary

Transcript-based displays