Transcript: Tm6sf1-005 OTTMUST00000060210.2

Description

transmembrane 6 superfamily member 1

Location

About this transcript

This transcript has 10 exons and is annotated with 10 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Tm6sf1-001	OTTMUST00000060206.1	2226	370aa	OTTMUSP00000029360	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21408	P58749
Tm6sf1-005	OTTMUST00000060210.2	1066	279aa	OTTMUSP00000029362	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS80744	D3YX52
Tm6sf1-002	OTTMUST00000060207.2	2251	161aa	OTTMUSP00000029361	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RD09
Tm6sf1-006	OTTMUST00000060434.1	679	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Tm6sf1-003	OTTMUST00000060208.2	3419	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tm6sf1-004	OTTMUST00000060209.1	2094	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Tm6sf1-007	OTTMUST00000060435.1	750	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,066 bps Translation length: 279 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS80744

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 01/10/2013 (Created on 11/04/2007)

Alternative symbols

AC102077.2-005

Other assemblies

This transcript maps to 81,862,687-81,883,419 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000119543

Curation Method

Manual annotation from Havana