Transcript: Rfx6-005 OTTMUST00000155709.1

Description

regulatory factor X, 6

Location

About this transcript

This transcript has 18 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Rfx6-003	OTTMUST00000061064.3	3464	927aa	OTTMUSP00000029881	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48558	Q8C7R7
Rfx6-001	OTTMUST00000060938.7	3088	663aa	OTTMUSP00000029789	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23835	-
Rfx6-005	OTTMUST00000155709.1	2682	893aa	OTTMUSP00000080905	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Rfx6-004	OTTMUST00000155710.1	2101	270aa	OTTMUSP00000080906	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Rfx6-002	OTTMUST00000060939.3	1896	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 2,682 bps Translation length: 893 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 29/07/2016 (Created on 29/07/2016)

Alternative symbols

RP23-320A6.1-005

Remarks

NAGNAG splice site

Other assemblies

This transcript maps to 51,677,810-51,729,806 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000219364

Curation Method

Manual annotation from Havana