Transcript: Ubfd1-005 OTTMUST00000062706.2

Description

ubiquitin family domain containing 1

Location

About this transcript

This transcript has 6 exons and is annotated with 1 domain and feature.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ubfd1-001	OTTMUST00000062699.1	4849	368aa	OTTMUSP00000030961	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS21808	Q78JW9
Ubfd1-005	OTTMUST00000062706.2	599	102aa	OTTMUSP00000074411	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ubfd1-004	OTTMUST00000062702.1	610	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ubfd1-002	OTTMUST00000062700.1	3300	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Ubfd1-003	OTTMUST00000062701.1	3001	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 599 bps Translation length: 102 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 17/06/2015 (Created on 22/05/2007)

Alternative symbols

AC124379.4-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 122,068,899-122,078,611 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000153640

Curation Method

Manual annotation from Havana