Transcript: Unc80-001 OTTMUST00000103888.1

Description

unc-80 homolog (C. elegans)

Location

Chromosome 1: 66,468,367-66,699,866 forward strand.

About this transcript

This transcript has 65 exons and is annotated with 26 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000026091 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
Unc80-001	OTTMUST00000103888.1	14331	3326aa	OTTMUSP00000058076	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48283
Unc80-007	OTTMUST00000150531.1	14047	3258aa	OTTMUSP00000078040	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-
Unc80-002	OTTMUST00000064846.1	1912	281aa	OTTMUSP00000032242	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Unc80-006	OTTMUST00000121897.1	3402	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
Unc80-004	OTTMUST00000064845.2	1118	298aa	OTTMUSP00000032241	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-
Unc80-003	OTTMUST00000064844.3	1167	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
Unc80-005	OTTMUST00000121896.1	587	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 65 Transcript length: 14,331 bps Translation length: 3,326 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS48283

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 08/06/2011)

Alternative symbols

AC118589.3-001

Remarks

A830080G15Rik

C030018G13Rik

CCDS48283.1

NP_780719

Other assemblies

This transcript maps to 66,468,367-66,699,866 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000061620

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Unc80-001 OTTMUST00000103888.1

Summary

Transcript-based displays