Transcript: Ggcx-005 OTTMUST00000142536.1

Description

gamma-glutamyl carboxylase

Location

Chromosome 6: 72,426,617-72,429,258 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000026391 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Ggcx-001	OTTMUST00000065266.1	2929	757aa	OTTMUSP00000032504	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20242	B2RS80
Ggcx-004	OTTMUST00000142535.1	2014	55aa	OTTMUSP00000074349	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RPU0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ggcx-003	OTTMUST00000142534.1	1099	125aa	OTTMUSP00000074348	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RPT2
Ggcx-002	OTTMUST00000065267.2	775	45aa	OTTMUSP00000074350	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RPG7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Ggcx-005	OTTMUST00000142536.1	569	50aa	OTTMUSP00000074351	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RNG6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 5 Transcript length: 569 bps Translation length: 50 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 12/06/2015 (Created on 12/06/2015)

Alternative symbols

RP23-60P18.5-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 72,426,617-72,429,258 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000207000 ENSMUST00000206507

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: Ggcx-005 OTTMUST00000142536.1

Summary

Transcript-based displays