Transcript: Amz1-006 OTTMUST00000110865.1

Description

archaelysin family metallopeptidase 1

Location

About this transcript

This transcript has 4 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Amz1-003	OTTMUST00000066396.2	4037	502aa	OTTMUSP00000033271	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19824	A1L312
Amz1-001	OTTMUST00000066380.1	2683	502aa	OTTMUSP00000033264	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19824	A1L312
Amz1-006	OTTMUST00000110865.1	2402	202aa	OTTMUSP00000061922	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Amz1-002	OTTMUST00000066395.1	1241	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Amz1-007	OTTMUST00000110864.1	455	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Amz1-004	OTTMUST00000066397.1	426	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Amz1-005	OTTMUST00000066398.1	350	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 2,402 bps Translation length: 202 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 01/09/2011)

Alternative symbols

AC158914.3-006

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 140,749,283-140,761,439 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000176035

Curation Method

Manual annotation from Havana