Transcript: Galntl6-006 OTTMUST00000139718.2

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6

Location

About this transcript

This transcript has 2 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Galntl6-001	OTTMUST00000139715.2	5680	601aa	OTTMUSP00000073289	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5D8G1
Galntl6-005	OTTMUST00000139716.1	1592	66aa	OTTMUSP00000073290	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SVA3
Galntl6-006	OTTMUST00000139718.2	575	63aa	OTTMUSP00000073291	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SVY4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Galntl6-003	OTTMUST00000067243.2	869	51aa	OTTMUSP00000034060	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	D6RIJ0
Galntl6-004	OTTMUST00000067238.2	886	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Galntl6-007	OTTMUST00000139717.1	567	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Galntl6-002	OTTMUST00000067242.3	912	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 2 Transcript length: 575 bps Translation length: 63 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 12/03/2015)

Alternative symbols

RP24-367H14.1-006

Annotation Attributes

not organism-supported [Definitions]

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 58,535,964-58,911,860 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000203398

Curation Method

Manual annotation from Havana