Transcript: Sema5b-003 OTTMUST00000067431.2

Description

sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B

Location

Chromosome 16: 35,541,362-35,664,261 forward strand.

About this transcript

This transcript has 21 exons and is annotated with 47 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000027281 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sema5b-001	OTTMUST00000067429.1	4350	1093aa	OTTMUSP00000033932	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS28140	Q60519
Sema5b-003	OTTMUST00000067431.2	4646	1122aa	OTTMUSP00000033933	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Sema5b-007	OTTMUST00000067435.2	1563	448aa	OTTMUSP00000034076	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6UDD7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Sema5b-006	OTTMUST00000067434.2	694	218aa	OTTMUSP00000034075	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6PZQ7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Sema5b-002	OTTMUST00000067430.3	2928	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sema5b-005	OTTMUST00000067433.1	766	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sema5b-004	OTTMUST00000067432.1	717	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sema5b-008	OTTMUST00000067654.1	268	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 21 Transcript length: 4,646 bps Translation length: 1,122 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 01/10/2013 (Created on 02/08/2007)

Alternative symbols

RP24-262N5.1-003

Other assemblies

This transcript maps to 35,541,362-35,664,261 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000120756

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: Sema5b-003 OTTMUST00000067431.2

Summary

Transcript-based displays