Transcript: Hmgcll1-006 OTTMUST00000117809.1

Description

3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1

Location

Chromosome 9: 76,014,855-76,136,350 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000027403 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Hmgcll1-001	OTTMUST00000067779.4	3737	343aa	OTTMUSP00000034160	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23349	Q8JZS7
Hmgcll1-006	OTTMUST00000117809.1	3239	177aa	OTTMUSP00000065826	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	V9GXD2
Hmgcll1-007	OTTMUST00000117810.3	1189	311aa	OTTMUSP00000065827	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	D3YVU9
Hmgcll1-005	OTTMUST00000117808.5	1136	240aa	OTTMUSP00000065825	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	V9GWZ9
Hmgcll1-002	OTTMUST00000067780.5	2020	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Hmgcll1-003	OTTMUST00000067781.5	1909	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hmgcll1-004	OTTMUST00000117966.1	660	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Hmgcll1-008	OTTMUST00000117812.1	363	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 3,239 bps Translation length: 177 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 04/07/2013 (Created on 21/06/2013)

Alternative symbols

RP23-343K17.1-006

Annotation Attributes

not organism-supported [Definitions]

Other assemblies

This transcript maps to 76,014,855-76,136,350 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000183425

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Hmgcll1-006 OTTMUST00000117809.1

Summary

Transcript-based displays