Transcript: Sike1-006 OTTMUST00000135627.1

Description

suppressor of IKBKE 1

Location

About this transcript

This transcript has 4 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sike1-001	OTTMUST00000071394.3	7375	207aa	OTTMUSP00000036579	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17690	Q9CPR7
Sike1-004	OTTMUST00000071397.1	774	124aa	OTTMUSP00000036580	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Sike1-006	OTTMUST00000135627.1	496	83aa	OTTMUSP00000071742	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Sike1-005	OTTMUST00000135628.1	2511	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sike1-002	OTTMUST00000071395.1	2418	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sike1-003	OTTMUST00000071396.1	322	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 496 bps Translation length: 83 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 23/10/2014 (Created on 23/10/2014)

Alternative symbols

AC163297.2-006

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 102,996,176-103,001,836 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000197601

Curation Method

Manual annotation from Havana