Transcript: Taf1c-001 OTTMUST00000077072.1

Description

TATA box binding protein (Tbp)-associated factor, RNA polymerase I, C

Location

About this transcript

This transcript has 15 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Taf1c-001	OTTMUST00000077072.1	3236	836aa	OTTMUSP00000040663	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40493	Q6PDZ2
Taf1c-002	OTTMUST00000077073.1	3309	220aa	OTTMUSP00000040664	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Taf1c-003	OTTMUST00000077074.1	577	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Taf1c-005	OTTMUST00000077076.1	441	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Taf1c-006	OTTMUST00000150401.1	3474	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Taf1c-004	OTTMUST00000077075.1	698	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 3,236 bps Translation length: 836 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40493

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 29/01/2016 (Created on 29/01/2008)

Alternative symbols

AC104882.3-001

Other assemblies

This transcript maps to 119,597,975-119,605,222 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000093099

Curation Method

Manual annotation from Havana