Transcript: Fndc3a-001 OTTMUST00000088038.1

Description

fibronectin type III domain containing 3A

Location

Chromosome 14: 72,537,946-72,710,003 reverse strand.

About this transcript

This transcript has 26 exons and is annotated with 52 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000034682 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Fndc3a-001	OTTMUST00000088038.1	6143	1198aa	OTTMUSP00000047963	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS27264	Q8BX90
Fndc3a-005	OTTMUST00000088042.1	4100	1154aa	OTTMUSP00000047965	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6TLV3	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Fndc3a-002	OTTMUST00000088039.2	1808	540aa	OTTMUSP00000047964	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CXY0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Fndc3a-007	OTTMUST00000088044.1	491	145aa	OTTMUSP00000047966	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F7BWH4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Fndc3a-004	OTTMUST00000088041.1	3109	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Fndc3a-003	OTTMUST00000088040.1	1262	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Fndc3a-006	OTTMUST00000088043.1	452	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 26 Transcript length: 6,143 bps Translation length: 1,198 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27264

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 02/10/2013 (Created on 23/06/2009)

Alternative symbols

RP24-199E5.1-001

Remarks

NP_997519.2

Other assemblies

This transcript maps to 72,537,946-72,710,003 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000089017

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Fndc3a-001 OTTMUST00000088038.1

Summary

Transcript-based displays