Transcript: Phf21b-001 OTTMUST00000088737.1

Description

PHD finger protein 21B

Location

About this transcript

This transcript has 13 exons and is annotated with 11 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Phf21b-001	OTTMUST00000088737.1	3639	487aa	OTTMUSP00000048401	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS37169	Q8C966
Phf21b-004	OTTMUST00000088740.1	3377	475aa	OTTMUSP00000048403	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8WGM2
Phf21b-002	OTTMUST00000088738.1	3973	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Phf21b-003	OTTMUST00000088739.1	2568	294aa	OTTMUSP00000048402	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Phf21b-007	OTTMUST00000088743.1	265	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Phf21b-006	OTTMUST00000088742.1	725	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Phf21b-005	OTTMUST00000088741.1	324	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 3,639 bps Translation length: 487 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37169

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 12/08/2009)

Alternative symbols

RP23-180L12.2-001

Other assemblies

This transcript maps to 84,785,384-84,856,049 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000159939

Curation Method

Manual annotation from Havana