Transcript: Depdc1b-002 OTTMUST00000093891.1

Description

DEP domain containing 1B

Location

About this transcript

This transcript has 13 exons and is annotated with 13 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Depdc1b-001	OTTMUST00000093889.1	2563	529aa	OTTMUSP00000052179	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS26762	Q8BH88
Depdc1b-003	OTTMUST00000093892.2	1404	467aa	OTTMUSP00000052181	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PW09
Depdc1b-002	OTTMUST00000093891.1	2042	529aa	OTTMUSP00000052180	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS26762	Q8BH88
Depdc1b-005	OTTMUST00000093893.1	549	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Depdc1b-004	OTTMUST00000093890.1	674	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Depdc1b-006	OTTMUST00000093894.1	655	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 2,042 bps Translation length: 529 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26762

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 03/08/2010)

Alternative symbols

RP23-346K5.1-002

Remarks

A730080N05Rik

Other assemblies

This transcript maps to 108,316,380-108,407,782 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000163307

Curation Method

Manual annotation from Havana