Transcript: Rfc1-005 OTTMUST00000097962.5

Description

replication factor C (activator 1) 1

Location

Chromosome 5: 65,262,602-65,335,618 reverse strand.

About this transcript

This transcript has 25 exons and is annotated with 23 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000038036 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Rfc1-001	OTTMUST00000097960.1	4751	1131aa	OTTMUSP00000054965	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39096	G3X8Z6
Rfc1-004	OTTMUST00000097964.4	4699	1130aa	OTTMUSP00000054968	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3UWX1
Rfc1-002	OTTMUST00000097963.3	4689	1145aa	OTTMUSP00000054967	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3UWX1
Rfc1-005	OTTMUST00000097962.5	3952	1132aa	OTTMUSP00000054966	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5U4B1
Rfc1-008	OTTMUST00000137811.2	638	212aa	OTTMUSP00000072535	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0N4SVN6	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Rfc1-003	OTTMUST00000097961.1	2185	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Rfc1-006	OTTMUST00000097965.2	1954	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rfc1-007	OTTMUST00000097967.1	485	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 25 Transcript length: 3,952 bps Translation length: 1,132 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 5, last modified on 12/01/2015 (Created on 19/04/2011)

Alternative symbols

RP23-344O11.1-005

Remarks

NAGNAG splice site

Other assemblies

This transcript maps to 65,262,602-65,335,618 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000203471

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Rfc1-005 OTTMUST00000097962.5

Summary

Transcript-based displays