Transcript: Avl9-001 OTTMUST00000103630.2

Description

AVL9 homolog (S. cerevisiase)

Location

About this transcript

This transcript has 16 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Avl9-001	OTTMUST00000103630.2	6670	649aa	OTTMUSP00000057919	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51789	Q80U56
Avl9-002	OTTMUST00000103631.2	1614	222aa	OTTMUSP00000074099	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Avl9-005	OTTMUST00000141918.1	585	91aa	OTTMUSP00000074100	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Avl9-004	OTTMUST00000141917.1	1414	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Avl9-003	OTTMUST00000103632.1	1198	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 6,670 bps Translation length: 649 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51789

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 29/05/2015 (Created on 02/06/2011)

Alternative symbols

RP24-179P9.4-001

Other assemblies

This transcript maps to 56,714,927-56,761,912 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000031805

Curation Method

Manual annotation from Havana