Transcript: Cdv3-005 OTTMUST00000124211.1

Description

carnitine deficiency-associated gene expressed in ventricle 3

Location

About this transcript

This transcript has 5 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cdv3-005	OTTMUST00000124211.1	3787	236aa	OTTMUSP00000067629	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS40748	-
Cdv3-003	OTTMUST00000124209.1	3741	109aa	OTTMUSP00000067627	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52902	F8WGL9
Cdv3-001	OTTMUST00000124208.2	3387	281aa	OTTMUSP00000067626	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS23454	Q4VAA2
Cdv3-002	OTTMUST00000124212.1	1023	235aa	OTTMUSP00000067630	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81064	A0A087WNP6
Cdv3-004	OTTMUST00000124210.1	3107	154aa	OTTMUSP00000067628	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WS49
Cdv3-007	OTTMUST00000124794.2	554	154aa	OTTMUSP00000067824	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WRM0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Cdv3-006	OTTMUST00000124213.1	3377	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 3,787 bps Translation length: 236 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40748

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 11/02/2014 (Created on 11/02/2014)

Alternative symbols

RP23-217J11.3-005

Remarks

NAGNAG splice site

Other assemblies

This transcript maps to 103,353,108-103,365,538 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000072249

Curation Method

Manual annotation from Havana