Transcript: RP24-468O24.4-002 OTTMUST00000131617.1

Description

novel protein 4930427A07Rik

Location

Chromosome 12: 113,156,440-113,166,048 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000052483 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RP24-468O24.4-001	OTTMUST00000131615.1	2441	420aa	OTTMUSP00000070321	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS49196	Q3UK37
RP24-468O24.4-002	OTTMUST00000131617.1	4000	139aa	OTTMUSP00000070322	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
RP24-468O24.4-006	OTTMUST00000131619.1	584	80aa	OTTMUSP00000070323	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
RP24-468O24.4-003	OTTMUST00000131620.1	2018	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
RP24-468O24.4-005	OTTMUST00000131618.1	624	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
RP24-468O24.4-004	OTTMUST00000131616.1	394	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 4,000 bps Translation length: 139 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 08/08/2014 (Created on 08/08/2014)

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 113,156,440-113,166,048 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000196755

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: RP24-468O24.4-002 OTTMUST00000131617.1

Summary

Transcript-based displays