Transcript: Trpc4-006 OTTMUST00000134033.1

Description

transient receptor potential cation channel, subfamily C, member 4

Location

About this transcript

This transcript has 11 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Trpc4-001	OTTMUST00000133841.3	3473	974aa	OTTMUSP00000071078	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17350	Q9QUQ5
Trpc4-002	OTTMUST00000133901.1	3170	890aa	OTTMUSP00000071105	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS79904	-
Trpc4-006	OTTMUST00000134033.1	3257	400aa	OTTMUSP00000071154	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0G2JEV6
Trpc4-004	OTTMUST00000133913.1	1380	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Trpc4-003	OTTMUST00000133900.1	2977	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Trpc4-005	OTTMUST00000133914.1	2790	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 3,257 bps Translation length: 400 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 18/09/2014 (Created on 18/09/2014)

Alternative symbols

RP23-335D16.1-006

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 54,156,615-54,318,416 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000200341

Curation Method

Manual annotation from Havana