Transcript: Vps33a-002 OTTMUST00000135540.1

Description

vacuolar protein sorting 33A (yeast)

Location

About this transcript

This transcript has 6 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Vps33a-001	OTTMUST00000135537.1	4235	598aa	OTTMUSP00000071712	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19666	Q9D2N9
Vps33a-002	OTTMUST00000135540.1	532	111aa	OTTMUSP00000071713	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0G2JEL2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Vps33a-004	OTTMUST00000135538.1	652	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Vps33a-003	OTTMUST00000135539.1	520	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 532 bps Translation length: 111 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 23/10/2014 (Created on 23/10/2014)

Alternative symbols

RP23-121M13.1-002

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 123,565,062-123,572,979 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000197467

Curation Method

Manual annotation from Havana