Transcript: Rassf6-005 OTTMUST00000137339.1

Description

Ras association (RalGDS/AF-6) domain family member 6

Location

Chromosome 5: 90,603,623-90,609,801 reverse strand.

About this transcript

This transcript has 7 exons.

Gene

This transcript is a product of gene OTTMUSG00000055490 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Rassf6-001	OTTMUST00000137337.1	1919	328aa	OTTMUSP00000072346	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS80327	-
Rassf6-006	OTTMUST00000137340.1	1178	341aa	OTTMUSP00000072348	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39142	G3X8Z9
Rassf6-007	OTTMUST00000137342.2	326	50aa	OTTMUSP00000072350	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Rassf6-003	OTTMUST00000137338.1	3250	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Rassf6-005	OTTMUST00000137339.1	959	31aa	OTTMUSP00000072347	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Rassf6-004	OTTMUST00000137341.1	442	41aa	OTTMUSP00000072349	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Rassf6-002	OTTMUST00000137343.1	2184	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 7 Transcript length: 959 bps Translation length: 31 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 16/12/2014 (Created on 16/12/2014)

Alternative symbols

RP24-63O24.3-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 90,603,623-90,609,801 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000202807

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Rassf6-005 OTTMUST00000137339.1

Summary

Transcript-based displays