Transcript: Plxna1-004 OTTMUST00000141715.1

Description

plexin A1

Location

About this transcript

This transcript has 6 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Plxna1-001	OTTMUST00000141713.1	9034	1894aa	OTTMUSP00000074003	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS20344	P70206
Plxna1-004	OTTMUST00000141715.1	678	16aa	OTTMUSP00000074004	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SUU1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Plxna1-002	OTTMUST00000141717.1	459	59aa	OTTMUSP00000074005	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0N4SW74	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Plxna1-003	OTTMUST00000141716.1	735	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Plxna1-005	OTTMUST00000141714.1	372	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 678 bps Translation length: 16 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 19/05/2015 (Created on 19/05/2015)

Alternative symbols

RP24-226D9.5-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 89,322,515-89,324,633 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000204468

Curation Method

Manual annotation from Havana