Description
trinucleotide repeat containing 6a
Location
Chromosome 7: 123,170,631-123,193,978 forward strand.
About this transcript
This transcript has 20 exons and is annotated with 17 domains and features.
Gene
This transcript is a product of gene OTTMUSG00000058124 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Tnrc6a-001 | OTTMUST00000142730.1 | 8183 | 1896aa | OTTMUSP00000074438 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS57583 | F6ZMJ4 | |
| Tnrc6a-005 | OTTMUST00000142733.1 | 5223 | 1398aa | OTTMUSP00000074440 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQ65 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| Tnrc6a-012 | OTTMUST00000142737.1 | 463 | 154aa | OTTMUSP00000074441 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0U1RQ94 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Tnrc6a-010 | OTTMUST00000142729.1 | 358 | 69aa | OTTMUSP00000074437 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| Tnrc6a-007 | OTTMUST00000142738.1 | 2447 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Tnrc6a-008 | OTTMUST00000142731.1 | 3625 | 51aa | OTTMUSP00000074439 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| Tnrc6a-009 | OTTMUST00000142728.1 | 688 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| Tnrc6a-002 | OTTMUST00000142734.1 | 4312 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Tnrc6a-006 | OTTMUST00000142739.1 | 3297 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Tnrc6a-003 | OTTMUST00000142732.1 | 1783 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Tnrc6a-004 | OTTMUST00000142735.1 | 939 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Tnrc6a-011 | OTTMUST00000142736.1 | 606 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
