Transcript: Vac14-004 OTTMUST00000151042.1

Description

Vac14 homolog (S. cerevisiae)

Location

About this transcript

This transcript has 17 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Vac14-002	OTTMUST00000151039.1	3069	782aa	OTTMUSP00000078330	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22663	Q80WQ2
Vac14-004	OTTMUST00000151042.1	5494	461aa	OTTMUSP00000078331	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Vac14-001	OTTMUST00000151038.1	3140	142aa	OTTMUSP00000078329	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Vac14-003	OTTMUST00000151040.1	2605	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Vac14-006	OTTMUST00000151043.1	2333	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Vac14-005	OTTMUST00000151041.1	2305	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 17 Transcript length: 5,494 bps Translation length: 461 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 25/02/2016 (Created on 25/02/2016)

Alternative symbols

RP23-309N16.1-004

Other assemblies

This transcript maps to 110,618,612-110,720,394 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000212829

Curation Method

Manual annotation from Havana