Transcript: SYN2-002 OTTHUMT00000339528.5

Description

synapsin II

Location

About this transcript

This transcript has 11 exons and is annotated with 22 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SYN2-002	OTTHUMT00000339528.5	3871	478aa	OTTHUMP00000275822	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS74901	A0A087X2E3
SYN2-001	OTTHUMT00000339526.9	2674	582aa	OTTHUMP00000275821	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS74900	A0A087WW96
SYN2-006	OTTHUMT00000339723.2	2356	221aa	OTTHUMP00000275823	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A087WW91	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SYN2-004	OTTHUMT00000339677.2	550	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYN2-007	OTTHUMT00000339724.2	520	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SYN2-005	OTTHUMT00000339678.2	2128	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 3,871 bps Translation length: 478 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS74901

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 5, last modified on 05/03/2014 (Created on 28/10/2008)

Alternative symbols

AC091492.1-002

Other assemblies

This transcript maps to 12,004,406-12,185,728 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000620175

Curation Method

Manual annotation from Havana