Description
TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)
Location
Chromosome 8: 84,689,286-84,695,473 forward strand.
About this transcript
This transcript has 7 exons and is annotated with 7 domains and features.
Gene
This transcript is a product of gene OTTMUSG00000022183 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
Trmt1-001 | OTTMUST00000052685.3 | 2567 | 663aa | OTTMUSP00000025015 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS40410 | A0A0R4IZW7 | |
Trmt1-002 | OTTMUST00000052686.2 | 2138 | 663aa | OTTMUSP00000025016 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS40410 | A0A0R4IZW7 | |
Trmt1-003 | OTTMUST00000052687.2 | 2044 | 656aa | OTTMUSP00000025017 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS52619 | E9PWD4 | |
Trmt1-018 | OTTMUST00000098524.1 | 2114 | 634aa | OTTMUSP00000055385 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BKS8 | |
Trmt1-007 | OTTMUST00000052691.4 | 921 | 260aa | OTTMUSP00000055383 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BL70 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Trmt1-019 | OTTMUST00000098519.2 | 902 | 173aa | OTTMUSP00000055382 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BKV3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Trmt1-026 | OTTMUST00000098525.2 | 840 | 221aa | OTTMUSP00000055386 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BK68 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Trmt1-004 | OTTMUST00000052688.3 | 825 | 242aa | OTTMUSP00000025018 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3Z413 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Trmt1-025 | OTTMUST00000098523.2 | 817 | 262aa | OTTMUSP00000055384 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BKB8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Trmt1-013 | OTTMUST00000052697.2 | 638 | 205aa | OTTMUSP00000055375 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V019 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Trmt1-017 | OTTMUST00000098507.1 | 2020 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
Trmt1-005 | OTTMUST00000052689.3 | 1104 | 114aa | OTTMUSP00000038916 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RG86 | |
Trmt1-010 | OTTMUST00000052694.2 | 810 | 103aa | OTTMUSP00000038917 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RFC0 | |
Trmt1-029 | OTTMUST00000099373.1 | 507 | 67aa | OTTMUSP00000055787 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BL74 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Trmt1-014 | OTTMUST00000052698.2 | 904 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Trmt1-006 | OTTMUST00000052690.2 | 895 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Trmt1-027 | OTTMUST00000098526.1 | 864 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Trmt1-021 | OTTMUST00000098518.1 | 502 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Trmt1-024 | OTTMUST00000098522.1 | 421 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Trmt1-022 | OTTMUST00000098520.1 | 384 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Trmt1-009 | OTTMUST00000052693.1 | 3647 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Trmt1-020 | OTTMUST00000098517.1 | 1014 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Trmt1-008 | OTTMUST00000052692.2 | 980 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Trmt1-011 | OTTMUST00000052695.2 | 871 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Trmt1-015 | OTTMUST00000052699.2 | 846 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Trmt1-012 | OTTMUST00000052696.2 | 665 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Trmt1-030 | OTTMUST00000099374.1 | 502 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Trmt1-016 | OTTMUST00000052700.1 | 463 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Trmt1-028 | OTTMUST00000098527.1 | 462 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Trmt1-023 | OTTMUST00000098521.1 | 435 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Trmt1-031 | OTTMUST00000099375.1 | 339 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |