Transcript: Lrrc56-002 OTTMUST00000056185.1

Description

leucine rich repeat containing 56

Location

About this transcript

This transcript has 12 exons and is annotated with 12 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lrrc56-003	OTTMUST00000056186.1	2502	552aa	OTTMUSP00000026973	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22004	Q8K375
Lrrc56-002	OTTMUST00000056185.1	2390	412aa	OTTMUSP00000026972	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52440	-
Lrrc56-001	OTTMUST00000056184.1	2197	552aa	OTTMUSP00000026971	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22004	Q8K375
Lrrc56-005	OTTMUST00000056188.2	381	107aa	OTTMUSP00000076787	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Lrrc56-007	OTTMUST00000147545.1	654	65aa	OTTMUSP00000076786	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Lrrc56-006	OTTMUST00000056189.1	399	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Lrrc56-004	OTTMUST00000056187.1	4340	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 12 Transcript length: 2,390 bps Translation length: 412 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS52440

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/10/2015 (Created on 19/02/2007)

Alternative symbols

AC108908.3-002

Other assemblies

This transcript maps to 141,194,157-141,210,055 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000084446

Curation Method

Manual annotation from Havana