Transcript: Lrrc56-005 OTTMUST00000056188.2

Description

leucine rich repeat containing 56

Location

About this transcript

This transcript has 3 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Lrrc56-003	OTTMUST00000056186.1	2502	552aa	OTTMUSP00000026973	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22004	Q8K375
Lrrc56-002	OTTMUST00000056185.1	2390	412aa	OTTMUSP00000026972	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52440	-
Lrrc56-001	OTTMUST00000056184.1	2197	552aa	OTTMUSP00000026971	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS22004	Q8K375
Lrrc56-005	OTTMUST00000056188.2	381	107aa	OTTMUSP00000076787	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Lrrc56-007	OTTMUST00000147545.1	654	65aa	OTTMUSP00000076786	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Lrrc56-006	OTTMUST00000056189.1	399	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Lrrc56-004	OTTMUST00000056187.1	4340	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 3 Transcript length: 381 bps Translation length: 107 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/10/2015 (Created on 19/02/2007)

Alternative symbols

AC108908.3-005

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 141,196,934-141,199,835 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000144008

Curation Method

Manual annotation from Havana