Transcript: Irx2-002 OTTMUST00000094477.1

Description

Iroquois related homeobox 2 (Drosophila)

Location

About this transcript

This transcript has 6 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Irx2-001	OTTMUST00000094478.3	2625	474aa	OTTMUSP00000052558	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS26628	P81066
Irx2-004	OTTMUST00000094483.3	559	13aa	OTTMUSP00000052562	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6ZTI9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Irx2-005	OTTMUST00000094480.3	449	93aa	OTTMUSP00000052560	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PZB5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Irx2-002	OTTMUST00000094477.1	2475	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Irx2-003	OTTMUST00000094479.2	515	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Irx2-006	OTTMUST00000094482.1	927	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 2,475 bps

Class

artifact [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 01/09/2010)

Alternative symbols

RP23-289E11.1-002

Remarks

non-canonical splice sites between exons 3 and 4

Other assemblies

This transcript maps to 72,628,797-72,634,196 in GRCm38 (Ensembl) coordinates.

Stable ID not present in Ensembl

Curation Method

Manual annotation from Havana