Transcript: Irx2-001 OTTMUST00000094478.3

Description

Iroquois related homeobox 2 (Drosophila)

Location

About this transcript

This transcript has 5 exons and is annotated with 17 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Irx2-001	OTTMUST00000094478.3	2625	474aa	OTTMUSP00000052558	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS26628	P81066
Irx2-004	OTTMUST00000094483.3	559	13aa	OTTMUSP00000052562	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6ZTI9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Irx2-005	OTTMUST00000094480.3	449	93aa	OTTMUSP00000052560	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PZB5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Irx2-002	OTTMUST00000094477.1	2475	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Irx2-003	OTTMUST00000094479.2	515	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Irx2-006	OTTMUST00000094482.1	927	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 2,625 bps Translation length: 474 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26628

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 06/12/2013 (Created on 01/09/2010)

Alternative symbols

RP23-289E11.1-001

Remarks

C820017E11Rik

CCDS26628.1

NP_034704

Other assemblies

This transcript maps to 72,628,820-72,634,198 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000074372

Curation Method

Manual annotation from Havana