Description
AT rich interactive domain 1A (SWI-like)
Synonyms
P270, C10rf4, BAF250, BAF250a, B120
Location
Chromosome 1: 26,693,236-26,782,104 forward strand.
VEGA68:CM000663.2
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
ARID1A-001 | OTTHUMT00000011437.3 | 8577 | 2285aa | OTTHUMP00000004117 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS285 | O14497 | |
ARID1A-002 | OTTHUMT00000011438.2 | 6268 | 2068aa | OTTHUMP00000004118 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS44091 | - | |
ARID1A-009 | OTTHUMT00000393246.2 | 7058 | 1903aa | OTTHUMP00000235225 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GTU5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
ARID1A-011 | OTTHUMT00000489309.1 | 6521 | 1901aa | OTTHUMP00000281982 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y488 | |
ARID1A-003 | OTTHUMT00000011439.4 | 6460 | 1902aa | OTTHUMP00000004119 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
ARID1A-012 | OTTHUMT00000489310.1 | 699 | 206aa | OTTHUMP00000281983 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GVT5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
ARID1A-007 | OTTHUMT00000393245.2 | 546 | 122aa | OTTHUMP00000235224 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PQW6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
ARID1A-008 | OTTHUMT00000393244.1 | 5175 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
ARID1A-004 | OTTHUMT00000096880.5 | 2699 | 144aa | OTTHUMP00000038068 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YCU6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
ARID1A-006 | OTTHUMT00000393247.1 | 2583 | 188aa | OTTHUMP00000235226 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YEW5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
ARID1A-016 | OTTHUMT00000489311.1 | 1388 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
ARID1A-014 | OTTHUMT00000489314.1 | 1068 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
ARID1A-018 | OTTHUMT00000489316.1 | 3450 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
ARID1A-013 | OTTHUMT00000489315.2 | 3046 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
ARID1A-017 | OTTHUMT00000489312.1 | 1324 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
ARID1A-015 | OTTHUMT00000489313.1 | 1128 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
ARID1A-005 | OTTHUMT00000096881.2 | 580 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |