Description
collagen, type IX, alpha 1
Location
Chromosome 6: 70,215,061-70,303,083 reverse strand.
VEGA68:CM000668.2
About this gene
This gene has 10 transcripts (splice variants), 11 orthologues and 8 paralogues.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
COL9A1-001 | OTTHUMT00000041131.2 | 4761 | 921aa | OTTHUMP00000016698 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4971 | P20849 | |
COL9A1-002 | OTTHUMT00000041132.3 | 3059 | 678aa | OTTHUMP00000016699 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS47447 | - | |
COL9A1-004 | OTTHUMT00000041134.1 | 1372 | 328aa | OTTHUMP00000016700 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
COL9A1-009 | OTTHUMT00000315865.1 | 1940 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
COL9A1-008 | OTTHUMT00000315864.1 | 1844 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
COL9A1-010 | OTTHUMT00000374944.1 | 699 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
COL9A1-007 | OTTHUMT00000315863.2 | 690 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
COL9A1-005 | OTTHUMT00000315861.2 | 1117 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL9A1-003 | OTTHUMT00000041133.1 | 531 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL9A1-006 | OTTHUMT00000315862.2 | 243 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |