Description
coagulation factor C homolog, cochlin (Limulus polyphemus)
Synonyms
COCH-5B2
Location
Chromosome 14: 30,874,514-30,895,065 forward strand.
VEGA68:CM000676.2
About this gene
This gene has 11 transcripts (splice variants), 10 orthologues and 8 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| COCH-005 | OTTHUMT00000276608.1 | 2536 | 550aa | OTTHUMP00000178782 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9640 | O43405 | |
| COCH-006 | OTTHUMT00000409701.1 | 2397 | 550aa | OTTHUMP00000244070 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9640 | O43405 | |
| COCH-007 | OTTHUMT00000409705.1 | 2688 | 438aa | OTTHUMP00000244075 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V4C4 | |
| COCH-008 | OTTHUMT00000409708.1 | 2129 | 434aa | OTTHUMP00000244077 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YJW4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COCH-003 | OTTHUMT00000073363.2 | 1997 | 494aa | OTTHUMP00000244072 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| COCH-011 | OTTHUMT00000409704.1 | 782 | 202aa | OTTHUMP00000244074 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V5X3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| COCH-012 | OTTHUMT00000409703.1 | 775 | 193aa | OTTHUMP00000244073 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V5V4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| COCH-014 | OTTHUMT00000409707.1 | 654 | 55aa | OTTHUMP00000244076 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YJJ0 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| COCH-010 | OTTHUMT00000409702.1 | 554 | 80aa | OTTHUMP00000244071 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V5G6 | |
| COCH-013 | OTTHUMT00000409706.1 | 635 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| COCH-009 | OTTHUMT00000409700.1 | 619 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
