Description
superkiller viralicidic activity 2-like (S. cerevisiae)
Synonyms
DDX13, SKIV2L1, SKI2W, 170A, HLP
Location
Chromosome 6: 31,959,080-31,969,755 forward strand.
VEGA68:CM000668.2
View alleles of this gene on alternate assemblies
About this gene
This gene has 17 transcripts (splice variants), 5 gene alleles, 13 orthologues and 9 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SKIV2L-001 | OTTHUMT00000076264.3 | 3894 | 1246aa | OTTHUMP00000029197 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4731 | Q15477 | |
| SKIV2L-013 | OTTHUMT00000268647.2 | 866 | 182aa | OTTHUMP00000215993 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SKIV2L-015 | OTTHUMT00000356493.1 | 3535 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SKIV2L-018 | OTTHUMT00000356496.1 | 2694 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SKIV2L-017 | OTTHUMT00000356495.1 | 3378 | 69aa | OTTHUMP00000215991 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SKIV2L-010 | OTTHUMT00000268644.2 | 1307 | 156aa | OTTHUMP00000215992 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SKIV2L-016 | OTTHUMT00000356494.1 | 1157 | 230aa | OTTHUMP00000215990 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | B4E0B4 | |
| SKIV2L-003 | OTTHUMT00000268639.1 | 720 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SKIV2L-012 | OTTHUMT00000268646.1 | 706 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SKIV2L-007 | OTTHUMT00000076266.3 | 691 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SKIV2L-011 | OTTHUMT00000268645.2 | 455 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SKIV2L-002 | OTTHUMT00000268638.2 | 4507 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SKIV2L-009 | OTTHUMT00000076267.2 | 931 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SKIV2L-008 | OTTHUMT00000268643.1 | 867 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SKIV2L-014 | OTTHUMT00000268736.1 | 734 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SKIV2L-005 | OTTHUMT00000268641.1 | 686 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SKIV2L-006 | OTTHUMT00000268642.1 | 583 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
