Description
runt-related transcription factor 1
Synonyms
AMLCR1, PEBP2A2
Location
Chromosome 21: 34,787,801-36,004,667 reverse strand.
VEGA68:CM000683.2
About this gene
This gene has 16 transcripts (splice variants) and 1 orthologue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RUNX1-001 | OTTHUMT00000194230.1 | 7274 | 453aa | OTTHUMP00000108696 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42922 | Q01196 | |
| RUNX1-002 | OTTHUMT00000194231.1 | 6222 | 480aa | OTTHUMP00000108697 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS13639 | - | |
| RUNX1-005 | OTTHUMT00000194234.2 | 2720 | 250aa | OTTHUMP00000108699 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46646 | Q01196 | |
| RUNX1-009 | OTTHUMT00000194238.1 | 1590 | 389aa | OTTHUMP00000108700 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H9KVB1 | |
| RUNX1-013 | OTTHUMT00000194245.6 | 1582 | 49aa | OTTHUMP00000274126 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RUNX1-012 | OTTHUMT00000194241.4 | 822 | 256aa | OTTHUMP00000108702 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A8MZI9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RUNX1-010 | OTTHUMT00000194239.2 | 610 | 140aa | OTTHUMP00000108701 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | C9JWM1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RUNX1-004 | OTTHUMT00000194233.4 | 346 | 32aa | OTTHUMP00000108698 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| RUNX1-003 | OTTHUMT00000194232.3 | 1710 | 38aa | OTTHUMP00000274125 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| RUNX1-015 | OTTHUMT00000194408.2 | 3622 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUNX1-017 | OTTHUMT00000194410.1 | 603 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUNX1-006 | OTTHUMT00000194235.1 | 537 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUNX1-016 | OTTHUMT00000194409.1 | 453 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUNX1-008 | OTTHUMT00000194237.1 | 264 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUNX1-014 | OTTHUMT00000194407.1 | 251 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RUNX1-007 | OTTHUMT00000194236.1 | 1790 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
