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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (2)
- Orthologues (3)
- Alt. alleles
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

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Gene: CXCL16 OTTHUMG00000090761

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Description

chemokine (C-X-C motif) ligand 16

Synonyms

SRPSOX, CXCLG16, SR-PSOX

Location

Chromosome 17: 4,733,526-4,739,922 reverse strand.

VEGA68:CM000679.2

About this gene

This gene has 5 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CXCL16-001	OTTHUMT00000207506.2	2222	273aa	OTTHUMP00000115953	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11052	-
CXCL16-002	OTTHUMT00000439577.1	1668	273aa	OTTHUMP00000257981	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11052	-
CXCL16-004	OTTHUMT00000439579.2	589	93aa	OTTHUMP00000257982	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	I3L333	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CXCL16-003	OTTHUMT00000439576.1	1484	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CXCL16-005	OTTHUMT00000439578.1	619	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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