Description
ceroid-lipofuscinosis, neuronal 3
Synonyms
BTN1, JNCL
Location
Chromosome 16: 28,474,111-28,495,575 reverse strand.
VEGA68:CM000678.2
About this gene
This gene has 62 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
CLN3-054 | OTTHUMT00000489717.1 | 3867 | 438aa | OTTHUMP00000282238 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10632 | Q13286 | |
CLN3-031 | OTTHUMT00000489689.3 | 3832 | 438aa | OTTHUMP00000282216 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10632 | Q13286 | |
CLN3-001 | OTTHUMT00000214115.3 | 1876 | 438aa | OTTHUMP00000122517 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS10632 | Q13286 | |
CLN3-006 | OTTHUMT00000430940.2 | 1840 | 414aa | OTTHUMP00000254078 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73855 | - | |
CLN3-007 | OTTHUMT00000430943.2 | 1720 | 384aa | OTTHUMP00000254080 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73854 | B4DFF3 | |
CLN3-038 | OTTHUMT00000489690.1 | 1608 | 414aa | OTTHUMP00000282217 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73855 | - | |
CLN3-042 | OTTHUMT00000489692.2 | 1452 | 384aa | OTTHUMP00000282222 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS73854 | B4DFF3 | |
CLN3-008 | OTTHUMT00000430942.1 | 1469 | 339aa | OTTHUMP00000254079 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
CLN3-009 | OTTHUMT00000430955.3 | 1430 | 285aa | OTTHUMP00000254088 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | F6TI76 | |
CLN3-020 | OTTHUMT00000430950.2 | 1318 | 421aa | OTTHUMP00000254086 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
CLN3-049 | OTTHUMT00000489712.1 | 1284 | 370aa | OTTHUMP00000282237 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GV71 | |
CLN3-011 | OTTHUMT00000430947.2 | 1224 | 336aa | OTTHUMP00000254083 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | O95086 | |
CLN3-005 | OTTHUMT00000489680.1 | 1173 | 390aa | OTTHUMP00000282210 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A0A0MRC7 | |
CLN3-045 | OTTHUMT00000489697.1 | 1084 | 269aa | OTTHUMP00000282224 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A1B0GV41 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLN3-044 | OTTHUMT00000489700.2 | 969 | 228aa | OTTHUMP00000282226 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BNK7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLN3-032 | OTTHUMT00000430956.2 | 758 | 28aa | OTTHUMP00000282221 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLN3-014 | OTTHUMT00000430962.3 | 688 | 167aa | OTTHUMP00000254091 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | O95090 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLN3-030 | OTTHUMT00000430964.2 | 650 | 176aa | OTTHUMP00000254092 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BR84 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLN3-055 | OTTHUMT00000489726.1 | 634 | 176aa | OTTHUMP00000282240 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLN3-027 | OTTHUMT00000430967.1 | 557 | 74aa | OTTHUMP00000254095 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BPL0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLN3-017 | OTTHUMT00000430966.2 | 1946 | 182aa | OTTHUMP00000254094 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BNK7 | |
CLN3-052 | OTTHUMT00000489719.1 | 1753 | 363aa | OTTHUMP00000282239 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A1B0GW34 | |
CLN3-003 | OTTHUMT00000430960.3 | 1606 | 131aa | OTTHUMP00000282211 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q9UP10 | |
CLN3-012 | OTTHUMT00000430945.2 | 1577 | 77aa | OTTHUMP00000254082 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | B4DMY6 | |
CLN3-037 | OTTHUMT00000489691.2 | 1536 | 131aa | OTTHUMP00000282218 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q9UP10 | |
CLN3-023 | OTTHUMT00000430953.3 | 1404 | 77aa | OTTHUMP00000282220 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CLN3-022 | OTTHUMT00000430952.2 | 1228 | 181aa | OTTHUMP00000282219 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q9UBD8 | |
CLN3-035 | OTTHUMT00000430954.1 | 1225 | 181aa | OTTHUMP00000254087 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q9UBD8 | |
CLN3-010 | OTTHUMT00000430958.2 | 1183 | 82aa | OTTHUMP00000254089 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A0D9SF04 | |
CLN3-015 | OTTHUMT00000430959.2 | 1168 | 181aa | OTTHUMP00000254090 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q9UBD8 | |
CLN3-019 | OTTHUMT00000430949.1 | 1109 | 253aa | OTTHUMP00000254085 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CLN3-018 | OTTHUMT00000430948.2 | 931 | 105aa | OTTHUMP00000254084 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | Q9UBH5 | |
CLN3-034 | OTTHUMT00000430939.2 | 790 | 218aa | OTTHUMP00000254077 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BMN4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
CLN3-043 | OTTHUMT00000489699.1 | 769 | 155aa | OTTHUMP00000282225 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BR00 | |
CLN3-059 | OTTHUMT00000489727.1 | 764 | 52aa | OTTHUMP00000282241 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CLN3-036 | OTTHUMT00000489693.1 | 495 | 53aa | OTTHUMP00000282223 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H3BUF8 | |
CLN3-040 | OTTHUMT00000489694.1 | 975 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CLN3-026 | OTTHUMT00000430971.1 | 616 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CLN3-029 | OTTHUMT00000430968.1 | 582 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CLN3-024 | OTTHUMT00000430972.1 | 570 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CLN3-041 | OTTHUMT00000489695.1 | 565 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CLN3-028 | OTTHUMT00000430970.1 | 551 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CLN3-025 | OTTHUMT00000430969.1 | 544 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CLN3-039 | OTTHUMT00000489696.1 | 533 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CLN3-016 | OTTHUMT00000430963.1 | 461 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CLN3-002 | OTTHUMT00000430941.1 | 3081 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-062 | OTTHUMT00000489722.1 | 2969 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-060 | OTTHUMT00000489724.1 | 2289 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-051 | OTTHUMT00000489720.1 | 2018 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-057 | OTTHUMT00000489716.1 | 1968 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-061 | OTTHUMT00000489715.1 | 1957 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-050 | OTTHUMT00000489723.1 | 1837 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-047 | OTTHUMT00000489713.2 | 1684 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-058 | OTTHUMT00000489718.1 | 1679 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-021 | OTTHUMT00000430951.2 | 1616 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-013 | OTTHUMT00000430961.2 | 1409 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-056 | OTTHUMT00000489725.1 | 1326 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-053 | OTTHUMT00000489721.1 | 1292 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-004 | OTTHUMT00000430957.1 | 1159 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-046 | OTTHUMT00000489698.1 | 1011 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-048 | OTTHUMT00000489714.1 | 801 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLN3-033 | OTTHUMT00000430946.1 | 759 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |