Description
matrin 3
Synonyms
MGC9105, VCPDM, KIAA0723
Location
Chromosome 5: 139,293,648-139,331,359 forward strand.
VEGA68:CM000667.2
About this gene
This gene has 28 transcripts (splice variants) and 2 orthologues.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
MATR3-002 | OTTHUMT00000251324.2 | 4843 | 847aa | OTTHUMP00000159532 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4210 | A0A0R4J2E8 | |
MATR3-046 | OTTHUMT00000373053.3 | 4018 | 847aa | OTTHUMP00000223761 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4210 | - | |
MATR3-010 | OTTHUMT00000373017.1 | 2664 | 509aa | OTTHUMP00000223740 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS75316 | B3KM87 | |
MATR3-008 | OTTHUMT00000373015.1 | 2518 | 559aa | OTTHUMP00000223738 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS54908 | - | |
MATR3-009 | OTTHUMT00000373016.1 | 3040 | 794aa | OTTHUMP00000223739 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6REM6 | |
MATR3-011 | OTTHUMT00000373018.2 | 1530 | 433aa | OTTHUMP00000223741 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6R991 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
MATR3-036 | OTTHUMT00000373043.2 | 1001 | 334aa | OTTHUMP00000223756 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y8T4 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
MATR3-045 | OTTHUMT00000373052.2 | 770 | 77aa | OTTHUMP00000223760 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
MATR3-044 | OTTHUMT00000373051.2 | 696 | 87aa | OTTHUMP00000223759 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
MATR3-028 | OTTHUMT00000373035.2 | 575 | 124aa | OTTHUMP00000223750 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RE02 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
MATR3-043 | OTTHUMT00000373050.2 | 564 | 100aa | OTTHUMP00000223758 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
MATR3-032 | OTTHUMT00000373039.2 | 561 | 78aa | OTTHUMP00000223752 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
MATR3-033 | OTTHUMT00000373040.1 | 532 | 172aa | OTTHUMP00000223753 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
MATR3-034 | OTTHUMT00000373041.2 | 447 | 121aa | OTTHUMP00000223754 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RBK5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
MATR3-035 | OTTHUMT00000373042.3 | 444 | 86aa | OTTHUMP00000223755 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
MATR3-029 | OTTHUMT00000373036.2 | 423 | 109aa | OTTHUMP00000223751 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RBI2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
MATR3-006 | OTTHUMT00000373013.1 | 2086 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
MATR3-041 | OTTHUMT00000373048.1 | 642 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
MATR3-037 | OTTHUMT00000373044.1 | 573 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
MATR3-039 | OTTHUMT00000373046.1 | 377 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
MATR3-005 | OTTHUMT00000373012.1 | 7306 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MATR3-007 | OTTHUMT00000373014.1 | 2560 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MATR3-004 | OTTHUMT00000373011.1 | 2250 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MATR3-031 | OTTHUMT00000373038.1 | 573 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MATR3-030 | OTTHUMT00000373037.1 | 571 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MATR3-040 | OTTHUMT00000373047.1 | 558 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MATR3-038 | OTTHUMT00000373045.1 | 556 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
MATR3-042 | OTTHUMT00000373049.1 | 362 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |