Description
scavenger receptor class B, member 2
Synonyms
LIMPII, SR-BII, LIMP-2, HLGP85
Location
Chromosome 4: 76,158,733-76,234,536 reverse strand.
VEGA68:CM000666.2
About this gene
This gene has 27 transcripts (splice variants), 5 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SCARB2-001 | OTTHUMT00000252403.2 | 4792 | 478aa | OTTHUMP00000160590 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS3577 | A0A024RDG6 | |
| SCARB2-002 | OTTHUMT00000362702.1 | 1495 | 335aa | OTTHUMP00000219176 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS56335 | - | |
| SCARB2-016 | OTTHUMT00000491697.2 | 4608 | 449aa | OTTHUMP00000283419 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SCARB2-007 | OTTHUMT00000491696.1 | 4507 | 320aa | OTTHUMP00000283418 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SCARB2-013 | OTTHUMT00000491698.1 | 4471 | 475aa | OTTHUMP00000283420 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SCARB2-027 | OTTHUMT00000491709.1 | 4284 | 438aa | OTTHUMP00000283425 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SCARB2-019 | OTTHUMT00000491712.1 | 3255 | 470aa | OTTHUMP00000283428 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SCARB2-022 | OTTHUMT00000491711.1 | 1734 | 519aa | OTTHUMP00000283427 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCARB2-021 | OTTHUMT00000491710.1 | 1517 | 174aa | OTTHUMP00000283426 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| SCARB2-011 | OTTHUMT00000491700.1 | 554 | 95aa | OTTHUMP00000283422 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCARB2-025 | OTTHUMT00000491708.1 | 4554 | 206aa | OTTHUMP00000283424 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SCARB2-014 | OTTHUMT00000491695.1 | 4355 | 145aa | OTTHUMP00000283417 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SCARB2-015 | OTTHUMT00000491699.1 | 3403 | 141aa | OTTHUMP00000283421 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SCARB2-009 | OTTHUMT00000491701.1 | 1922 | 432aa | OTTHUMP00000283423 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SCARB2-003 | OTTHUMT00000362703.2 | 545 | 106aa | OTTHUMP00000219177 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RDG0 | |
| SCARB2-012 | OTTHUMT00000491704.1 | 842 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SCARB2-004 | OTTHUMT00000362704.3 | 5817 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCARB2-018 | OTTHUMT00000491706.1 | 4811 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCARB2-024 | OTTHUMT00000491716.1 | 4415 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCARB2-006 | OTTHUMT00000491703.1 | 2753 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCARB2-026 | OTTHUMT00000491715.1 | 2552 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCARB2-023 | OTTHUMT00000491713.1 | 1991 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCARB2-020 | OTTHUMT00000491714.1 | 1579 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCARB2-005 | OTTHUMT00000362705.2 | 860 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCARB2-008 | OTTHUMT00000491705.1 | 689 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCARB2-017 | OTTHUMT00000491707.2 | 554 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SCARB2-010 | OTTHUMT00000491702.1 | 531 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
