Description
calnexin
Synonyms
CNX, IP90, P90
Location
Chromosome 5: 179,678,628-179,730,925 forward strand.
VEGA68:CM000667.2
About this gene
This gene has 19 transcripts (splice variants), 3 orthologues and 2 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CANX-001 | OTTHUMT00000253500.2 | 4260 | 592aa | OTTHUMP00000161516 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4447 | P27824 | |
| CANX-005 | OTTHUMT00000371747.2 | 4207 | 592aa | OTTHUMP00000223187 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4447 | P27824 | |
| CANX-002 | OTTHUMT00000371744.2 | 2232 | 592aa | OTTHUMP00000223184 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS4447 | P27824 | |
| CANX-003 | OTTHUMT00000371745.2 | 1000 | 308aa | OTTHUMP00000223185 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RGY2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CANX-006 | OTTHUMT00000371755.2 | 825 | 134aa | OTTHUMP00000223188 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RAU8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CANX-009 | OTTHUMT00000371763.2 | 727 | 107aa | OTTHUMP00000223195 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RAQ8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CANX-017 | OTTHUMT00000371822.2 | 592 | 131aa | OTTHUMP00000223215 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RFL1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CANX-021 | OTTHUMT00000371868.2 | 585 | 144aa | OTTHUMP00000223232 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RB85 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CANX-008 | OTTHUMT00000371762.2 | 582 | 78aa | OTTHUMP00000223194 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RHJ3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CANX-007 | OTTHUMT00000371761.2 | 570 | 168aa | OTTHUMP00000223193 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RDP7 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CANX-010 | OTTHUMT00000371764.3 | 569 | 32aa | OTTHUMP00000223196 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CANX-014 | OTTHUMT00000371819.2 | 568 | 189aa | OTTHUMP00000223213 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y9H1 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| CANX-018 | OTTHUMT00000371823.2 | 511 | 170aa | OTTHUMP00000223216 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y9Q7 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| CANX-004 | OTTHUMT00000371746.1 | 1876 | 96aa | OTTHUMP00000223186 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RD16 | |
| CANX-020 | OTTHUMT00000371825.1 | 533 | 61aa | OTTHUMP00000223218 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RG29 | |
| CANX-016 | OTTHUMT00000371821.2 | 592 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CANX-011 | OTTHUMT00000371765.2 | 345 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CANX-015 | OTTHUMT00000371820.1 | 549 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CANX-012 | OTTHUMT00000371766.1 | 485 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
