Description
SMAD family member 4
Synonyms
DPC4
Location
Chromosome 18: 51,028,394-51,085,045 forward strand.
VEGA68:CM000680.2
About this gene
This gene has 17 transcripts (splice variants).
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
SMAD4-001 | OTTHUMT00000255993.3 | 8495 | 552aa | OTTHUMP00000163548 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11950 | A0A024R274 | |
SMAD4-004 | OTTHUMT00000449729.2 | 1371 | 456aa | OTTHUMP00000263316 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EIU8 | |
SMAD4-008 | OTTHUMT00000449733.1 | 992 | 151aa | OTTHUMP00000263321 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ENG8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMAD4-016 | OTTHUMT00000449750.2 | 779 | 126aa | OTTHUMP00000263331 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EL18 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMAD4-010 | OTTHUMT00000449735.2 | 582 | 120aa | OTTHUMP00000263322 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EL15 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMAD4-006 | OTTHUMT00000449727.2 | 576 | 90aa | OTTHUMP00000263314 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ENG1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMAD4-013 | OTTHUMT00000449754.2 | 568 | 82aa | OTTHUMP00000263442 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7ELK2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
SMAD4-007 | OTTHUMT00000449728.3 | 544 | 140aa | OTTHUMP00000263315 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | K7EIJ2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SMAD4-003 | OTTHUMT00000449567.2 | 3202 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
SMAD4-017 | OTTHUMT00000476331.1 | 1648 | 220aa | OTTHUMP00000275574 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087WUF3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
SMAD4-005 | OTTHUMT00000449730.1 | 1306 | 320aa | OTTHUMP00000263317 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | K7ES96 | |
SMAD4-014 | OTTHUMT00000449755.1 | 784 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMAD4-009 | OTTHUMT00000449734.1 | 475 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
SMAD4-002 | OTTHUMT00000449565.2 | 4970 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SMAD4-011 | OTTHUMT00000449751.1 | 563 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SMAD4-012 | OTTHUMT00000449753.1 | 545 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SMAD4-015 | OTTHUMT00000449752.1 | 459 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |