Description
sorting nexin 6
Location
Chromosome 14: 34,561,094-34,630,183 reverse strand.
VEGA68:CM000676.2
About this gene
This gene has 10 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
SNX6-001 | OTTHUMT00000276641.1 | 3398 | 290aa | OTTHUMP00000178808 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9648 | - | |
SNX6-002 | OTTHUMT00000276642.3 | 2001 | 418aa | OTTHUMP00000178809 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS41942 | A0A0A0MRI2 | |
SNX6-005 | OTTHUMT00000409857.2 | 725 | 239aa | OTTHUMP00000244187 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V5X9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SNX6-009 | OTTHUMT00000409860.3 | 467 | 132aa | OTTHUMP00000244189 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V5U2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
SNX6-003 | OTTHUMT00000409853.1 | 1855 | 32aa | OTTHUMP00000244147 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
SNX6-004 | OTTHUMT00000409854.2 | 1215 | 169aa | OTTHUMP00000244184 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V4Z5 | |
SNX6-008 | OTTHUMT00000409856.2 | 851 | 150aa | OTTHUMP00000244185 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YJF8 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
SNX6-006 | OTTHUMT00000409858.2 | 559 | 132aa | OTTHUMP00000244188 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V2U1 | |
SNX6-007 | OTTHUMT00000409859.2 | 539 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
SNX6-010 | OTTHUMT00000409855.1 | 339 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |