Description
signal recognition particle 54kDa
Location
Chromosome 14: 34,981,957-35,029,567 forward strand.
VEGA68:CM000676.2
About this gene
This gene has 12 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SRP54-001 | OTTHUMT00000276643.2 | 2327 | 504aa | OTTHUMP00000178810 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9652 | P61011 | |
| SRP54-002 | OTTHUMT00000410559.2 | 1949 | 440aa | OTTHUMP00000244496 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V4F7 | |
| SRP54-005 | OTTHUMT00000410554.2 | 572 | 43aa | OTTHUMP00000244494 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V346 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SRP54-006 | OTTHUMT00000410555.2 | 558 | 74aa | OTTHUMP00000244495 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | G3V480 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SRP54-003 | OTTHUMT00000410558.1 | 1844 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SRP54-010 | OTTHUMT00000410560.1 | 600 | 55aa | OTTHUMP00000244497 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | G3V3L9 | |
| SRP54-007 | OTTHUMT00000410561.1 | 552 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SRP54-008 | OTTHUMT00000410557.1 | 644 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SRP54-012 | OTTHUMT00000410562.1 | 573 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SRP54-011 | OTTHUMT00000410563.1 | 530 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SRP54-013 | OTTHUMT00000410564.1 | 529 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SRP54-009 | OTTHUMT00000410556.1 | 491 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
