Description
collagen, type I, alpha 1
Synonyms
OI4
Location
Chromosome 17: 50,183,289-50,201,632 reverse strand.
VEGA68:CM000679.2
About this gene
This gene has 14 transcripts (splice variants), 2 orthologues and 1 paralogue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
COL1A1-001 | OTTHUMT00000309036.3 | 6727 | 1464aa | OTTHUMP00000192905 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11561 | P02452 | |
COL1A1-013 | OTTHUMT00000366880.3 | 549 | 154aa | OTTHUMP00000258264 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
COL1A1-017 | OTTHUMT00000366884.4 | 1627 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
COL1A1-006 | OTTHUMT00000309041.1 | 1192 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL1A1-018 | OTTHUMT00000467339.1 | 1147 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL1A1-009 | OTTHUMT00000309044.2 | 836 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL1A1-016 | OTTHUMT00000366883.2 | 789 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL1A1-002 | OTTHUMT00000309037.1 | 640 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL1A1-005 | OTTHUMT00000309040.1 | 614 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL1A1-007 | OTTHUMT00000309042.3 | 600 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL1A1-003 | OTTHUMT00000309038.1 | 594 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL1A1-014 | OTTHUMT00000366881.1 | 481 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL1A1-004 | OTTHUMT00000309039.1 | 403 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
COL1A1-008 | OTTHUMT00000309043.1 | 396 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |