Description
claudin domain containing 1
Location
Chromosome 3: 98,497,912-98,523,066 reverse strand.
VEGA68:CM000665.2
About this gene
This gene has 31 transcripts (splice variants) and 1 orthologue.
Transcripts
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
CLDND1-006 | OTTHUMT00000359071.1 | 2818 | 253aa | OTTHUMP00000217424 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2930 | Q9NY35 | |
CLDND1-004 | OTTHUMT00000359069.2 | 2228 | 253aa | OTTHUMP00000217422 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2930 | Q9NY35 | |
CLDND1-002 | OTTHUMT00000359022.3 | 2170 | 276aa | OTTHUMP00000217407 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS46877 | Q9NY35 | |
CLDND1-001 | OTTHUMT00000359021.2 | 2161 | 253aa | OTTHUMP00000217406 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2930 | Q9NY35 | |
CLDND1-005 | OTTHUMT00000359070.2 | 2159 | 253aa | OTTHUMP00000217423 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2930 | Q9NY35 | |
CLDND1-003 | OTTHUMT00000359023.1 | 2124 | 253aa | OTTHUMP00000217408 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2930 | Q9NY35 | |
CLDND1-023 | OTTHUMT00000359362.1 | 999 | 253aa | OTTHUMP00000217626 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS2930 | Q9NY35 | |
CLDND1-014 | OTTHUMT00000359320.1 | 642 | 158aa | OTTHUMP00000217588 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS43116 | - | |
CLDND1-007 | OTTHUMT00000359073.2 | 1380 | 210aa | OTTHUMP00000217563 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RC11 | |
CLDND1-020 | OTTHUMT00000359359.2 | 1013 | 213aa | OTTHUMP00000217623 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6R9S8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-009 | OTTHUMT00000359315.1 | 916 | 236aa | OTTHUMP00000217584 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RFX6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-019 | OTTHUMT00000359358.3 | 903 | 177aa | OTTHUMP00000217622 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RDY1 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-010 | OTTHUMT00000359316.2 | 871 | 223aa | OTTHUMP00000217585 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RCE6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-013 | OTTHUMT00000359319.2 | 865 | 239aa | OTTHUMP00000217587 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RDI6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-025 | OTTHUMT00000359364.2 | 862 | 244aa | OTTHUMP00000217628 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RCR8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-032 | OTTHUMT00000359385.1 | 750 | 155aa | OTTHUMP00000217638 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0Y8T9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
CLDND1-011 | OTTHUMT00000359317.2 | 681 | 172aa | OTTHUMP00000217586 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RHU6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-024 | OTTHUMT00000359363.8 | 663 | 180aa | OTTHUMP00000217627 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RA76 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-018 | OTTHUMT00000359339.2 | 582 | 121aa | OTTHUMP00000217611 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RCP3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-017 | OTTHUMT00000359338.2 | 573 | 100aa | OTTHUMP00000217610 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RB31 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-008 | OTTHUMT00000359294.2 | 560 | 87aa | OTTHUMP00000217562 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6R9K1 | |
CLDND1-022 | OTTHUMT00000359361.2 | 556 | 145aa | OTTHUMP00000217625 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-016 | OTTHUMT00000359337.2 | 539 | 138aa | OTTHUMP00000217609 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RIU2 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-031 | OTTHUMT00000359384.1 | 538 | 72aa | OTTHUMP00000217637 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YA53 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
CLDND1-026 | OTTHUMT00000359365.3 | 414 | 89aa | OTTHUMP00000217629 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D6RD48 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
CLDND1-030 | OTTHUMT00000359383.1 | 569 | 106aa | OTTHUMP00000217636 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
CLDND1-012 | OTTHUMT00000359318.2 | 707 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
CLDND1-028 | OTTHUMT00000359371.1 | 815 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLDND1-015 | OTTHUMT00000359321.1 | 778 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLDND1-027 | OTTHUMT00000359370.1 | 598 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
CLDND1-029 | OTTHUMT00000359382.1 | 520 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |